Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.42□□□□□ -0.58
Sox17Q61473 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Gm10156-201ENSMUST00000122364 462 ntBASIC11.42□□□□□ -0.58
Sox17Q61473 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sox17Q61473 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Gm8810-201ENSMUST00000172895 754 ntBASIC11.42□□□□□ -0.58
Sox17Q61473 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox17Q61473 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox17Q61473 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.42□□□□□ -0.58
Sox17Q61473 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox17Q61473 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox17Q61473 Gm10146-201ENSMUST00000072739 309 ntBASIC11.42□□□□□ -0.58
Sox17Q61473 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.42□□□□□ -0.58
Sox17Q61473 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sox17Q61473 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sox17Q61473 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sox17Q61473 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox17Q61473 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Gm27331-201ENSMUST00000183705 60 ntBASIC11.41□□□□□ -0.58
Sox17Q61473 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.41□□□□□ -0.58
Sox17Q61473 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.41□□□□□ -0.58
Sox17Q61473 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox17Q61473 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox17Q61473 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox17Q61473 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox17Q61473 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox17Q61473 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox17Q61473 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox17Q61473 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox17Q61473 Gm12203-201ENSMUST00000118235 598 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Gm11803-201ENSMUST00000119966 444 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Gm12209-201ENSMUST00000120089 596 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Gm11637-201ENSMUST00000120601 592 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox17Q61473 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox17Q61473 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.4□□□□□ -0.58
Sox17Q61473 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms