Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col11a1Q61245 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col11a1Q61245 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col11a1Q61245 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.4□□□□□ -0.26
Col11a1Q61245 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col11a1Q61245 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col11a1Q61245 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm25554-201ENSMUST00000158075 113 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm20495-201ENSMUST00000173902 235 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm26272-201ENSMUST00000179241 132 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.39□□□□□ -0.27
Col11a1Q61245 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm16030-201ENSMUST00000159098 603 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm6114-201ENSMUST00000182472 968 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 Gm5982-201ENSMUST00000196234 512 ntBASIC13.39□□□□□ -0.27
Col11a1Q61245 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Col11a1Q61245 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col11a1Q61245 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col11a1Q61245 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.38□□□□□ -0.27
Col11a1Q61245 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.38□□□□□ -0.27
Col11a1Q61245 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.38□□□□□ -0.27
Col11a1Q61245 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.38□□□□□ -0.27
Col11a1Q61245 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.38□□□□□ -0.27
Col11a1Q61245 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a1Q61245 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col11a1Q61245 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a1Q61245 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a1Q61245 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.37□□□□□ -0.27
Col11a1Q61245 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Col11a1Q61245 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm8451-201ENSMUST00000170338 447 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm7741-201ENSMUST00000181445 989 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col11a1Q61245 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm7536-201ENSMUST00000077389 444 ntBASIC13.37□□□□□ -0.27
Col11a1Q61245 Gm5453-201ENSMUST00000080866 447 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms