Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.69□□□□□ -0.06
Mre11Q61216 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.69□□□□□ -0.06
Mre11Q61216 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.69□□□□□ -0.06
Mre11Q61216 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.69□□□□□ -0.06
Mre11Q61216 Gm7775-201ENSMUST00000218871 853 ntBASIC14.69□□□□□ -0.06
Mre11Q61216 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.69□□□□□ -0.06
Mre11Q61216 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Mre11Q61216 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.69□□□□□ -0.06
Mre11Q61216 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.69□□□□□ -0.06
Mre11Q61216 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 AC159195.3-201ENSMUST00000225162 2211 ntBASIC14.69□□□□□ -0.06
Mre11Q61216 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Mre11Q61216 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.69□□□□□ -0.06
Mre11Q61216 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mre11Q61216 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Mre11Q61216 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Mre11Q61216 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Mre11Q61216 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Mre11Q61216 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.68□□□□□ -0.06
Mre11Q61216 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.68□□□□□ -0.06
Mre11Q61216 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Gm5687-201ENSMUST00000118252 640 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Gm8312-201ENSMUST00000119380 618 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.68□□□□□ -0.06
Mre11Q61216 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Mre11Q61216 Gm23363-201ENSMUST00000175024 79 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.68□□□□□ -0.06
Mre11Q61216 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.68□□□□□ -0.06
Mre11Q61216 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.68□□□□□ -0.06
Mre11Q61216 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mre11Q61216 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Mre11Q61216 CT025681.1-201ENSMUST00000225453 1855 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm25927-201ENSMUST00000175058 117 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Gm21854-201ENSMUST00000179901 471 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.67□□□□□ -0.06
Mre11Q61216 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.67□□□□□ -0.06
Mre11Q61216 Itm2b-204ENSMUST00000228637 783 ntBASIC14.67□□□□□ -0.06
Mre11Q61216 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Mre11Q61216 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mre11Q61216 Gm8420-201ENSMUST00000097103 598 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms