Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Paupar-201ENSMUST00000194826 3482 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm25562-201ENSMUST00000104608 133 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm25569-201ENSMUST00000157175 131 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm12418-201ENSMUST00000118116 942 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm8384-201ENSMUST00000190905 704 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Gm18010-201ENSMUST00000203553 202 ntBASIC11.73□□□□□ -0.53
Col12a1Q60847 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col12a1Q60847 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.73□□□□□ -0.53
Col12a1Q60847 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm23595-201ENSMUST00000104306 130 ntBASIC11.72□□□□□ -0.53
Col12a1Q60847 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm33707-201ENSMUST00000195135 569 ntBASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.72□□□□□ -0.53
Col12a1Q60847 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.72□□□□□ -0.53
Col12a1Q60847 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm26976-201ENSMUST00000182929 908 ntBASIC11.72□□□□□ -0.53
Col12a1Q60847 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.72□□□□□ -0.53
Col12a1Q60847 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col12a1Q60847 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col12a1Q60847 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col12a1Q60847 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm8152-201ENSMUST00000120842 637 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm30055-201ENSMUST00000203175 803 ntBASIC11.71□□□□□ -0.53
Col12a1Q60847 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col12a1Q60847 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col12a1Q60847 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms