Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm29615-201ENSMUST00000185371 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28224-201ENSMUST00000186078 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm29001-201ENSMUST00000186177 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28292-201ENSMUST00000186593 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28101-201ENSMUST00000187608 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm29076-201ENSMUST00000187689 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28302-201ENSMUST00000187931 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28646-201ENSMUST00000188220 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28205-201ENSMUST00000189177 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm29032-201ENSMUST00000189797 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm28695-201ENSMUST00000190300 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm32999-201ENSMUST00000192693 562 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm37448-201ENSMUST00000192795 697 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.76□□□□□ -0.37
Satb1Q60611 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Gm5369-201ENSMUST00000217499 588 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.76□□□□□ -0.37
Satb1Q60611 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Satb1Q60611 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.76□□□□□ -0.37
Satb1Q60611 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Satb1Q60611 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Satb1Q60611 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.76□□□□□ -0.37
Satb1Q60611 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Satb1Q60611 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Satb1Q60611 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Satb1Q60611 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Satb1Q60611 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Satb1Q60611 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Satb1Q60611 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Satb1Q60611 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Satb1Q60611 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Satb1Q60611 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Satb1Q60611 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Satb1Q60611 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Satb1Q60611 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Satb1Q60611 Gm23153-201ENSMUST00000175323 313 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Satb1Q60611 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Satb1Q60611 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Satb1Q60611 Gm10076-201ENSMUST00000073238 384 ntBASIC12.75□□□□□ -0.37
Satb1Q60611 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Satb1Q60611 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Satb1Q60611 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Satb1Q60611 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Satb1Q60611 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Daam2-202ENSMUST00000224595 1926 ntBASIC12.74□□□□□ -0.37
Satb1Q60611 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Satb1Q60611 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.74□□□□□ -0.37
Satb1Q60611 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Satb1Q60611 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms