Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shroom1Q5SX79 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Gm18626-201ENSMUST00000221512 1409 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Gm24934-201ENSMUST00000103764 111 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Gm23949-201ENSMUST00000104027 127 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13□□□□□ -0.33
Shroom1Q5SX79 AC169036.1-201ENSMUST00000227994 296 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Mypopos-202ENSMUST00000205975 2321 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13□□□□□ -0.33
Shroom1Q5SX79 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13□□□□□ -0.33
Shroom1Q5SX79 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Shroom1Q5SX79 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Shroom1Q5SX79 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Shroom1Q5SX79 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms