Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm26286-201ENSMUST00000104166 134 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Rprl1-201ENSMUST00000158050 327 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc88aQ5SNZ0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm15744-201ENSMUST00000161734 213 ntBASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm8100-201ENSMUST00000182906 988 ntBASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm28324-201ENSMUST00000187913 264 ntBASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc88aQ5SNZ0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm23771-201ENSMUST00000178702 110 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm8343-201ENSMUST00000182705 994 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc88aQ5SNZ0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms