Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8062-201ENSMUST00000139696 444 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm13570-201ENSMUST00000140763 309 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm2546-201ENSMUST00000182630 991 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm4034-201ENSMUST00000187674 480 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm38158-201ENSMUST00000194617 339 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm42937-201ENSMUST00000197360 752 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5d-4Q5R1F6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Mospd4-201ENSMUST00000180618 576 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm27572-201ENSMUST00000183702 255 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 AY702102-202ENSMUST00000194651 1173 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm19309-201ENSMUST00000218295 205 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm9823-201ENSMUST00000051212 327 ntBASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5d-4Q5R1F6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav5d-4Q5R1F6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms