Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gm22175-201ENSMUST00000175007 78 ntBASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav3-3Q5R1C3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm27702-201ENSMUST00000184512 56 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3-3Q5R1C3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3-3Q5R1C3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms