Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm7851-201ENSMUST00000117574 323 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm12501-201ENSMUST00000119163 529 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm12516-201ENSMUST00000120819 385 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm13366-201ENSMUST00000122198 970 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm5733-201ENSMUST00000190232 939 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm43184-201ENSMUST00000197247 542 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm5434-202ENSMUST00000222384 1451 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Gm5434-201ENSMUST00000071825 1451 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim41Q5NCC3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Gm11246-201ENSMUST00000120880 345 ntBASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim41Q5NCC3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm37861-201ENSMUST00000193534 2869 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm13286-201ENSMUST00000117750 537 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm4157-201ENSMUST00000211647 679 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm807-202ENSMUST00000224929 408 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC21.23■□□□□ 0.99
Trim41Q5NCC3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim41Q5NCC3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm23912-201ENSMUST00000104687 87 ntBASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim41Q5NCC3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Gm9136-201ENSMUST00000193368 454 ntBASIC21.21■□□□□ 0.99
Trim41Q5NCC3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 CT009713.8-201ENSMUST00000225448 560 ntBASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim41Q5NCC3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms