Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctdnep1Q3TP92 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm12036-201ENSMUST00000120008 530 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.06□□□□□ -0.16
Ctdnep1Q3TP92 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gm15547-201ENSMUST00000122152 333 ntBASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gm17931-201ENSMUST00000208132 634 ntBASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctdnep1Q3TP92 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ctdnep1Q3TP92 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms