Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trim63Q38HM4 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Trim63Q38HM4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10□□□□□ -0.81
Trim63Q38HM4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Gm14005-209ENSMUST00000224993 1832 ntBASIC10□□□□□ -0.81
Trim63Q38HM4 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trim63Q38HM4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Trim63Q38HM4 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC10□□□□□ -0.81
Trim63Q38HM4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10□□□□□ -0.81
Trim63Q38HM4 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim63Q38HM4 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10□□□□□ -0.81
Trim63Q38HM4 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm25990-201ENSMUST00000102440 86 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm11439-201ENSMUST00000118598 409 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm29310-201ENSMUST00000185468 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21825-201ENSMUST00000185728 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm29109-201ENSMUST00000185895 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21896-201ENSMUST00000186520 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21873-201ENSMUST00000186728 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21794-201ENSMUST00000187056 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21880-201ENSMUST00000187275 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21826-201ENSMUST00000187451 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21198-201ENSMUST00000188393 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21749-201ENSMUST00000189343 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21901-201ENSMUST00000189568 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm29424-201ENSMUST00000189716 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm28599-201ENSMUST00000189838 694 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21867-201ENSMUST00000189917 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm29269-201ENSMUST00000190087 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21722-201ENSMUST00000190153 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm28423-201ENSMUST00000190701 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21899-201ENSMUST00000190745 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21910-201ENSMUST00000191163 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21849-201ENSMUST00000191571 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm28678-201ENSMUST00000191593 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm20910-201ENSMUST00000193268 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm21871-201ENSMUST00000194621 696 ntBASIC9.99□□□□□ -0.81
Trim63Q38HM4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim63Q38HM4 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms