Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Mmp11Q02853 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Mmp11Q02853 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.88□□□□□ -0.51
Mmp11Q02853 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm24255-201ENSMUST00000104481 128 ntBASIC11.87□□□□□ -0.51
Mmp11Q02853 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm27046-201ENSMUST00000182160 463 ntBASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Gm18711-201ENSMUST00000199341 750 ntBASIC11.87□□□□□ -0.51
Mmp11Q02853 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Olfr582-201ENSMUST00000098212 960 ntBASIC11.87□□□□□ -0.51
Mmp11Q02853 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.87□□□□□ -0.51
Mmp11Q02853 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Mmp11Q02853 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Mmp11Q02853 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm14644-201ENSMUST00000116671 647 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm12015-201ENSMUST00000117065 843 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm14109-201ENSMUST00000118814 309 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm8885-201ENSMUST00000189382 598 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.86□□□□□ -0.51
Mmp11Q02853 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mmp11Q02853 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms