Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.08□□□□□ -0.32
VcpQ01853 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VcpQ01853 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.07□□□□□ -0.32
VcpQ01853 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.07□□□□□ -0.32
VcpQ01853 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
VcpQ01853 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.07□□□□□ -0.32
VcpQ01853 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.07□□□□□ -0.32
VcpQ01853 Gm5070-201ENSMUST00000177599 862 ntBASIC13.07□□□□□ -0.32
VcpQ01853 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.07□□□□□ -0.32
VcpQ01853 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.07□□□□□ -0.32
VcpQ01853 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.07□□□□□ -0.32
VcpQ01853 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VcpQ01853 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VcpQ01853 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.07□□□□□ -0.32
VcpQ01853 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VcpQ01853 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VcpQ01853 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VcpQ01853 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.06□□□□□ -0.32
VcpQ01853 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Daam2-202ENSMUST00000224595 1926 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VcpQ01853 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VcpQ01853 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Gm13875-201ENSMUST00000120162 282 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.06□□□□□ -0.32
VcpQ01853 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.06□□□□□ -0.32
VcpQ01853 Gm9555-201ENSMUST00000200908 583 ntBASIC13.06□□□□□ -0.32
VcpQ01853 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Gm8285-201ENSMUST00000208293 759 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.06□□□□□ -0.32
VcpQ01853 Gm10752-201ENSMUST00000218348 729 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
VcpQ01853 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VcpQ01853 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VcpQ01853 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
VcpQ01853 Matn2-203ENSMUST00000226766 3252 ntBASIC13.06□□□□□ -0.32
VcpQ01853 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.06□□□□□ -0.32
VcpQ01853 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcpQ01853 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VcpQ01853 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VcpQ01853 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcpQ01853 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms