Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GabpaQ00422 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GabpaQ00422 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.84□□□□□ -0.19
GabpaQ00422 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GabpaQ00422 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.83□□□□□ -0.19
GabpaQ00422 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GabpaQ00422 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
GabpaQ00422 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm8199-201ENSMUST00000121323 823 ntBASIC13.83□□□□□ -0.2
GabpaQ00422 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm7467-201ENSMUST00000185173 652 ntBASIC13.83□□□□□ -0.2
GabpaQ00422 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.83□□□□□ -0.2
GabpaQ00422 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm5705-201ENSMUST00000066241 711 ntBASIC13.83□□□□□ -0.2
GabpaQ00422 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
GabpaQ00422 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.83□□□□□ -0.2
GabpaQ00422 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
GabpaQ00422 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GabpaQ00422 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.82□□□□□ -0.2
GabpaQ00422 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm15432-201ENSMUST00000121106 195 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.82□□□□□ -0.2
GabpaQ00422 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm9797-202ENSMUST00000218003 294 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.82□□□□□ -0.2
GabpaQ00422 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
GabpaQ00422 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GabpaQ00422 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
GabpaQ00422 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
GabpaQ00422 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.81□□□□□ -0.2
GabpaQ00422 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GabpaQ00422 Gm24891-201ENSMUST00000104391 136 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms