Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm16479-201ENSMUST00000121706 932 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm26185-201ENSMUST00000157692 266 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm16379-201ENSMUST00000161469 348 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Thumpd3P97770 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm8762-201ENSMUST00000193486 339 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm43118-201ENSMUST00000199149 775 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm3961-201ENSMUST00000204425 994 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm18935-201ENSMUST00000212692 664 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd3P97770 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.44□□□□□ -0.42
Thumpd3P97770 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd3P97770 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm25261-201ENSMUST00000157416 134 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm22121-201ENSMUST00000175148 54 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 Mir8109-201ENSMUST00000184375 117 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Gm45930-201ENSMUST00000221330 292 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.43□□□□□ -0.42
Thumpd3P97770 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd3P97770 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd3P97770 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.42□□□□□ -0.42
Thumpd3P97770 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Thumpd3P97770 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Thumpd3P97770 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Thumpd3P97770 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.42□□□□□ -0.42
Thumpd3P97770 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd3P97770 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms