Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm22920-201ENSMUST00000102175 109 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm23912-201ENSMUST00000104687 87 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm14193-201ENSMUST00000105067 153 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm13916-201ENSMUST00000117368 628 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm12579-201ENSMUST00000118040 783 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm8731-201ENSMUST00000118088 412 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm4654-201ENSMUST00000183305 982 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm42657-201ENSMUST00000201746 211 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcc1P97496 Gm2875-201ENSMUST00000211333 360 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 AC154184.3-201ENSMUST00000225620 1090 ntBASIC15.27■□□□□ 0.04
Smarcc1P97496 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc1P97496 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc1P97496 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc1P97496 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Smarcc1P97496 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc1P97496 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc1P97496 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc1P97496 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.27■□□□□ 0.03
Smarcc1P97496 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm13937-201ENSMUST00000121000 988 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm19091-201ENSMUST00000208120 978 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.26■□□□□ 0.03
Smarcc1P97496 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc1P97496 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcc1P97496 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm11660-201ENSMUST00000120955 412 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm22442-201ENSMUST00000157256 144 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm29499-201ENSMUST00000189151 486 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm28329-201ENSMUST00000191208 689 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm29171-201ENSMUST00000191397 486 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm17877-201ENSMUST00000192578 814 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm6867-201ENSMUST00000219165 425 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.25■□□□□ 0.03
Smarcc1P97496 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc1P97496 Gm26035-201ENSMUST00000083065 308 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms