Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.25□□□□□ -0.77
SgcaP82350 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.25□□□□□ -0.77
SgcaP82350 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SgcaP82350 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SgcaP82350 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.25□□□□□ -0.77
SgcaP82350 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
SgcaP82350 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SgcaP82350 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.25□□□□□ -0.77
SgcaP82350 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.25□□□□□ -0.77
SgcaP82350 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.25□□□□□ -0.77
SgcaP82350 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SgcaP82350 Rgr-203ENSMUST00000225070 4704 ntBASIC10.25□□□□□ -0.77
SgcaP82350 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SgcaP82350 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SgcaP82350 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SgcaP82350 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SgcaP82350 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SgcaP82350 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SgcaP82350 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Gm14760-201ENSMUST00000121831 999 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SgcaP82350 Gm27306-201ENSMUST00000183970 107 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Gm27989-201ENSMUST00000184721 107 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.24□□□□□ -0.77
SgcaP82350 Gm29667-201ENSMUST00000190817 490 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.24□□□□□ -0.77
SgcaP82350 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.24□□□□□ -0.77
SgcaP82350 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcaP82350 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
SgcaP82350 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
SgcaP82350 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcaP82350 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SgcaP82350 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcaP82350 BC043934-202ENSMUST00000185694 2356 ntBASIC10.23□□□□□ -0.77
SgcaP82350 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms