Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx3P70354 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.55□□□□□ -0.4
Msx3P70354 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.55□□□□□ -0.4
Msx3P70354 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Msx3P70354 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Msx3P70354 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.55□□□□□ -0.4
Msx3P70354 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.55□□□□□ -0.4
Msx3P70354 Gm45880-201ENSMUST00000213041 853 ntBASIC12.55□□□□□ -0.4
Msx3P70354 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx3P70354 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.55□□□□□ -0.4
Msx3P70354 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx3P70354 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx3P70354 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Msx3P70354 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.54□□□□□ -0.4
Msx3P70354 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx3P70354 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gm13786-201ENSMUST00000122371 333 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.54□□□□□ -0.4
Msx3P70354 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.54□□□□□ -0.4
Msx3P70354 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Msx3P70354 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 Gm43118-201ENSMUST00000199149 775 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx3P70354 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Morn2-202ENSMUST00000227729 656 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx3P70354 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx3P70354 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.54□□□□□ -0.4
Msx3P70354 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx3P70354 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx3P70354 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Msx3P70354 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Msx3P70354 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Msx3P70354 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Msx3P70354 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Msx3P70354 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms