Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.21□□□□□ -0.77
Pdlim4P70271 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.21□□□□□ -0.77
Pdlim4P70271 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.21□□□□□ -0.77
Pdlim4P70271 Gm43822-201ENSMUST00000200285 476 ntBASIC10.21□□□□□ -0.77
Pdlim4P70271 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pdlim4P70271 Gm6334-201ENSMUST00000207083 228 ntBASIC10.21□□□□□ -0.77
Pdlim4P70271 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pdlim4P70271 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pdlim4P70271 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.21□□□□□ -0.77
Pdlim4P70271 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.21□□□□□ -0.77
Pdlim4P70271 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pdlim4P70271 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Pdlim4P70271 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
Pdlim4P70271 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.21□□□□□ -0.78
Pdlim4P70271 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.21□□□□□ -0.78
Pdlim4P70271 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.21□□□□□ -0.78
Pdlim4P70271 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Pdlim4P70271 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pdlim4P70271 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.2□□□□□ -0.78
Pdlim4P70271 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm11222-201ENSMUST00000119005 738 ntBASIC10.2□□□□□ -0.78
Pdlim4P70271 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm6621-201ENSMUST00000193251 772 ntBASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.2□□□□□ -0.78
Pdlim4P70271 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.2□□□□□ -0.78
Pdlim4P70271 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pdlim4P70271 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm12314-201ENSMUST00000118104 538 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm9022-201ENSMUST00000182482 992 ntBASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.19□□□□□ -0.78
Pdlim4P70271 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms