Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm24526-201ENSMUST00000082921 158 ntBASIC10.85□□□□□ -0.67
Sf3b6P59708 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sf3b6P59708 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sf3b6P59708 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm10156-201ENSMUST00000122364 462 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm26185-201ENSMUST00000157692 266 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm17150-201ENSMUST00000165577 381 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm27839-201ENSMUST00000184242 106 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sf3b6P59708 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 BC043934-202ENSMUST00000185694 2356 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.84□□□□□ -0.67
Sf3b6P59708 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.84□□□□□ -0.67
Sf3b6P59708 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sf3b6P59708 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sf3b6P59708 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sf3b6P59708 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sf3b6P59708 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.83□□□□□ -0.68
Sf3b6P59708 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms