Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.72□□□□□ -0.53
Ythdf1P59326 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.72□□□□□ -0.53
Ythdf1P59326 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.72□□□□□ -0.53
Ythdf1P59326 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ythdf1P59326 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.72□□□□□ -0.53
Ythdf1P59326 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ythdf1P59326 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ythdf1P59326 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.71□□□□□ -0.53
Ythdf1P59326 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.71□□□□□ -0.53
Ythdf1P59326 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.71□□□□□ -0.53
Ythdf1P59326 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Gm9797-201ENSMUST00000052902 613 ntBASIC11.71□□□□□ -0.53
Ythdf1P59326 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.71□□□□□ -0.53
Ythdf1P59326 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ythdf1P59326 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.71□□□□□ -0.54
Ythdf1P59326 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.71□□□□□ -0.54
Ythdf1P59326 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.71□□□□□ -0.54
Ythdf1P59326 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ythdf1P59326 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.7□□□□□ -0.54
Ythdf1P59326 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.7□□□□□ -0.54
Ythdf1P59326 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ythdf1P59326 Gm23119-201ENSMUST00000158610 140 ntBASIC11.7□□□□□ -0.54
Ythdf1P59326 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ythdf1P59326 Gm5354-201ENSMUST00000182417 973 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms