Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Tpm2P58774 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm38671-201ENSMUST00000200573 130 ntBASIC14.04□□□□□ -0.16
Tpm2P58774 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.04□□□□□ -0.16
Tpm2P58774 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Tpm2P58774 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tpm2P58774 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tpm2P58774 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tpm2P58774 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Gm14921-201ENSMUST00000118643 908 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Mir339-201ENSMUST00000083659 96 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC14.03□□□□□ -0.16
Tpm2P58774 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Gm44826-201ENSMUST00000207648 2332 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.03□□□□□ -0.16
Tpm2P58774 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tpm2P58774 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tpm2P58774 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tpm2P58774 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Tpm2P58774 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tpm2P58774 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Tpm2P58774 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.02□□□□□ -0.17
Tpm2P58774 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tpm2P58774 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.02□□□□□ -0.17
Tpm2P58774 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.02□□□□□ -0.17
Tpm2P58774 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.02□□□□□ -0.17
Tpm2P58774 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.02□□□□□ -0.17
Tpm2P58774 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.02□□□□□ -0.17
Tpm2P58774 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.02□□□□□ -0.17
Tpm2P58774 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tpm2P58774 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Tpm2P58774 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.02□□□□□ -0.17
Tpm2P58774 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tpm2P58774 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms