Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lim2P56563 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Lim2P56563 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lim2P56563 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lim2P56563 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.21□□□□□ -0.45
Lim2P56563 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.21□□□□□ -0.45
Lim2P56563 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.21□□□□□ -0.45
Lim2P56563 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.21□□□□□ -0.45
Lim2P56563 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.21□□□□□ -0.45
Lim2P56563 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.21□□□□□ -0.45
Lim2P56563 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.21□□□□□ -0.45
Lim2P56563 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lim2P56563 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Lim2P56563 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.46
Lim2P56563 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.21□□□□□ -0.46
Lim2P56563 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lim2P56563 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Lim2P56563 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Lim2P56563 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lim2P56563 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Lim2P56563 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Lim2P56563 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.2□□□□□ -0.46
Lim2P56563 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.2□□□□□ -0.46
Lim2P56563 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.2□□□□□ -0.46
Lim2P56563 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.2□□□□□ -0.46
Lim2P56563 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 Gzmn-202ENSMUST00000225535 989 ntBASIC12.2□□□□□ -0.46
Lim2P56563 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Gm9996-201ENSMUST00000070359 913 ntBASIC12.2□□□□□ -0.46
Lim2P56563 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lim2P56563 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lim2P56563 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lim2P56563 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lim2P56563 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lim2P56563 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Lim2P56563 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Lim2P56563 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lim2P56563 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lim2P56563 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lim2P56563 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.19□□□□□ -0.46
Lim2P56563 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms