Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Cdh11P55288 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh11P55288 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh11P55288 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh11P55288 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cdh11P55288 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh11P55288 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cdh11P55288 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh11P55288 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdh11P55288 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Cdh11P55288 Gm27501-201ENSMUST00000183599 107 ntBASIC11.15□□□□□ -0.62
Cdh11P55288 Gm18935-201ENSMUST00000212692 664 ntBASIC11.15□□□□□ -0.62
Cdh11P55288 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh11P55288 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh11P55288 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cdh11P55288 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh11P55288 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh11P55288 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh11P55288 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cdh11P55288 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.15□□□□□ -0.63
Cdh11P55288 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh11P55288 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh11P55288 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh11P55288 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh11P55288 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh11P55288 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.14□□□□□ -0.63
Cdh11P55288 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh11P55288 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm12363-201ENSMUST00000122250 668 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Cdh11P55288 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm25261-201ENSMUST00000157416 134 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gm6222-202ENSMUST00000182143 629 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm29396-201ENSMUST00000185659 716 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm44364-201ENSMUST00000198368 141 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm4768-201ENSMUST00000206199 686 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Olfr284-202ENSMUST00000206647 966 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Mir339-201ENSMUST00000083659 96 ntBASIC11.14□□□□□ -0.63
Cdh11P55288 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdh11P55288 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh11P55288 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms