Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nub1P54729 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nub1P54729 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nub1P54729 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Gm24255-201ENSMUST00000104481 128 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.19□□□□□ -0.3
Nub1P54729 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.19□□□□□ -0.3
Nub1P54729 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Gm3961-201ENSMUST00000204425 994 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nub1P54729 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nub1P54729 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nub1P54729 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.19□□□□□ -0.3
Nub1P54729 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nub1P54729 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Nub1P54729 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nub1P54729 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nub1P54729 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nub1P54729 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.18□□□□□ -0.3
Nub1P54729 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.18□□□□□ -0.3
Nub1P54729 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nub1P54729 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nub1P54729 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.18□□□□□ -0.3
Nub1P54729 Gm7783-201ENSMUST00000204795 781 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Nub1P54729 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nub1P54729 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.18□□□□□ -0.3
Nub1P54729 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nub1P54729 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nub1P54729 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.17□□□□□ -0.3
Nub1P54729 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms