Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.52□□□□□ -0.41
ClgnP52194 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
ClgnP52194 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.52□□□□□ -0.41
ClgnP52194 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.52□□□□□ -0.41
ClgnP52194 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.52□□□□□ -0.41
ClgnP52194 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.52□□□□□ -0.41
ClgnP52194 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClgnP52194 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Gm10434-201ENSMUST00000101158 471 ntBASIC12.51□□□□□ -0.41
ClgnP52194 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ClgnP52194 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.51□□□□□ -0.41
ClgnP52194 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Gm25261-201ENSMUST00000157416 134 ntBASIC12.51□□□□□ -0.41
ClgnP52194 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.51□□□□□ -0.41
ClgnP52194 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ClgnP52194 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.51□□□□□ -0.41
ClgnP52194 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.51□□□□□ -0.41
ClgnP52194 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.51□□□□□ -0.41
ClgnP52194 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Gm25857-201ENSMUST00000082788 129 ntBASIC12.51□□□□□ -0.41
ClgnP52194 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ClgnP52194 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClgnP52194 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.5□□□□□ -0.41
ClgnP52194 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.5□□□□□ -0.41
ClgnP52194 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.5□□□□□ -0.41
ClgnP52194 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClgnP52194 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.5□□□□□ -0.41
ClgnP52194 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.5□□□□□ -0.41
ClgnP52194 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.5□□□□□ -0.41
ClgnP52194 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.5□□□□□ -0.41
ClgnP52194 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ClgnP52194 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm5186-201ENSMUST00000218781 920 ntBASIC12.5□□□□□ -0.41
ClgnP52194 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.5□□□□□ -0.41
ClgnP52194 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ClgnP52194 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClgnP52194 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
ClgnP52194 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms