Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Shmt1P50431 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Gm12217-201ENSMUST00000118858 696 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 B9d1os-201ENSMUST00000137010 674 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Mir5120-201ENSMUST00000175020 78 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 Gm18711-201ENSMUST00000199341 750 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shmt1P50431 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.91□□□□□ -0.34
Shmt1P50431 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shmt1P50431 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.9□□□□□ -0.34
Shmt1P50431 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Shmt1P50431 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm14247-201ENSMUST00000120950 237 ntBASIC12.9□□□□□ -0.34
Shmt1P50431 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shmt1P50431 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Mir6979-201ENSMUST00000183927 56 ntBASIC12.9□□□□□ -0.34
Shmt1P50431 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.9□□□□□ -0.34
Shmt1P50431 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
Shmt1P50431 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm19208-201ENSMUST00000213861 912 ntBASIC12.9□□□□□ -0.34
Shmt1P50431 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
Shmt1P50431 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shmt1P50431 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Shmt1P50431 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.9□□□□□ -0.34
Shmt1P50431 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shmt1P50431 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Shmt1P50431 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Shmt1P50431 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.9□□□□□ -0.35
Shmt1P50431 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Shmt1P50431 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.9□□□□□ -0.35
Shmt1P50431 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.89□□□□□ -0.35
Shmt1P50431 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.89□□□□□ -0.35
Shmt1P50431 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.89□□□□□ -0.35
Shmt1P50431 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.89□□□□□ -0.35
Shmt1P50431 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.89□□□□□ -0.35
Shmt1P50431 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Shmt1P50431 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shmt1P50431 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Shmt1P50431 Gm23912-201ENSMUST00000104687 87 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms