Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SftpbP50405 Gm11591-201ENSMUST00000120063 702 ntBASIC12.48□□□□□ -0.41
SftpbP50405 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.48□□□□□ -0.41
SftpbP50405 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.48□□□□□ -0.41
SftpbP50405 Gm45925-201ENSMUST00000218882 744 ntBASIC12.48□□□□□ -0.41
SftpbP50405 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SftpbP50405 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SftpbP50405 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.48□□□□□ -0.41
SftpbP50405 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SftpbP50405 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.47□□□□□ -0.41
SftpbP50405 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.47□□□□□ -0.41
SftpbP50405 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.47□□□□□ -0.41
SftpbP50405 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SftpbP50405 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Gm7809-201ENSMUST00000153199 742 ntBASIC12.47□□□□□ -0.41
SftpbP50405 Gm23119-201ENSMUST00000158610 140 ntBASIC12.47□□□□□ -0.41
SftpbP50405 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
SftpbP50405 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.47□□□□□ -0.41
SftpbP50405 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SftpbP50405 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SftpbP50405 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SftpbP50405 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.46□□□□□ -0.41
SftpbP50405 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SftpbP50405 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SftpbP50405 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SftpbP50405 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.46□□□□□ -0.41
SftpbP50405 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SftpbP50405 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.46□□□□□ -0.41
SftpbP50405 Gm4984-201ENSMUST00000115987 360 ntBASIC12.46□□□□□ -0.41
SftpbP50405 Gm12390-201ENSMUST00000117897 397 ntBASIC12.46□□□□□ -0.41
SftpbP50405 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.46□□□□□ -0.41
SftpbP50405 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.46□□□□□ -0.41
SftpbP50405 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.46□□□□□ -0.41
SftpbP50405 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.46□□□□□ -0.41
SftpbP50405 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SftpbP50405 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms