Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LtbrP50284 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LtbrP50284 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LtbrP50284 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LtbrP50284 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LtbrP50284 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LtbrP50284 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LtbrP50284 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.47□□□□□ -0.09
LtbrP50284 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LtbrP50284 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LtbrP50284 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LtbrP50284 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LtbrP50284 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.46□□□□□ -0.09
LtbrP50284 Gm12899-201ENSMUST00000120565 551 ntBASIC14.46□□□□□ -0.09
LtbrP50284 Gm12196-201ENSMUST00000120954 262 ntBASIC14.46□□□□□ -0.09
LtbrP50284 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.46□□□□□ -0.09
LtbrP50284 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Gm22923-201ENSMUST00000174952 110 ntBASIC14.46□□□□□ -0.09
LtbrP50284 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
LtbrP50284 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.46□□□□□ -0.09
LtbrP50284 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Gm270-201ENSMUST00000223010 976 ntBASIC14.46□□□□□ -0.09
LtbrP50284 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.46□□□□□ -0.09
LtbrP50284 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.46□□□□□ -0.09
LtbrP50284 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LtbrP50284 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
LtbrP50284 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LtbrP50284 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
LtbrP50284 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LtbrP50284 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LtbrP50284 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
LtbrP50284 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LtbrP50284 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LtbrP50284 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.45□□□□□ -0.1
LtbrP50284 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LtbrP50284 Gm16296-201ENSMUST00000159905 325 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Gm20392-201ENSMUST00000173047 701 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Mir7076-201ENSMUST00000183519 74 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Gm10774-201ENSMUST00000188689 204 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Gm29288-201ENSMUST00000191582 901 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.45□□□□□ -0.1
LtbrP50284 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.45□□□□□ -0.1
LtbrP50284 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.45□□□□□ -0.1
LtbrP50284 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LtbrP50284 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.45□□□□□ -0.1
LtbrP50284 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.44□□□□□ -0.1
LtbrP50284 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LtbrP50284 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LtbrP50284 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LtbrP50284 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms