Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Prox1P48437 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Prox1P48437 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Prox1P48437 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm8213-201ENSMUST00000118191 441 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gm26185-201ENSMUST00000157692 266 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm8602-201ENSMUST00000184045 607 ntBASIC11.74□□□□□ -0.53
Prox1P48437 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm28911-201ENSMUST00000188837 117 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.74□□□□□ -0.53
Prox1P48437 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.74□□□□□ -0.53
Prox1P48437 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Prox1P48437 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.74□□□□□ -0.53
Prox1P48437 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.74□□□□□ -0.53
Prox1P48437 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Prox1P48437 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Prox1P48437 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.73□□□□□ -0.53
Prox1P48437 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Prox1P48437 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prox1P48437 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Prox1P48437 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.73□□□□□ -0.53
Prox1P48437 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.73□□□□□ -0.53
Prox1P48437 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Gm17208-201ENSMUST00000168388 535 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 BC043934-202ENSMUST00000185694 2356 ntBASIC11.73□□□□□ -0.53
Prox1P48437 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.73□□□□□ -0.53
Prox1P48437 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Prox1P48437 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Prox1P48437 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms