Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
Rfx3P48381 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm14760-201ENSMUST00000121831 999 ntBASIC11.05□□□□□ -0.64
Rfx3P48381 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.05□□□□□ -0.64
Rfx3P48381 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
Rfx3P48381 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm27731-201ENSMUST00000185192 107 ntBASIC11.05□□□□□ -0.64
Rfx3P48381 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.05□□□□□ -0.64
Rfx3P48381 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rfx3P48381 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.05□□□□□ -0.64
Rfx3P48381 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.04□□□□□ -0.64
Rfx3P48381 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.04□□□□□ -0.64
Rfx3P48381 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rfx3P48381 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.04□□□□□ -0.64
Rfx3P48381 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.04□□□□□ -0.64
Rfx3P48381 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rfx3P48381 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.04□□□□□ -0.64
Rfx3P48381 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rfx3P48381 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.03□□□□□ -0.64
Rfx3P48381 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.03□□□□□ -0.64
Rfx3P48381 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.03□□□□□ -0.64
Rfx3P48381 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Mir1982-201ENSMUST00000157368 74 ntBASIC11.03□□□□□ -0.64
Rfx3P48381 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.03□□□□□ -0.64
Rfx3P48381 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.03□□□□□ -0.64
Rfx3P48381 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.03□□□□□ -0.64
Rfx3P48381 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rfx3P48381 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms