Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm22146-201ENSMUST00000157397 288 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm12407-201ENSMUST00000180219 324 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm45500-201ENSMUST00000211676 803 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.54□□□□□ -0.4
Cxcl12P40224 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl12P40224 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl12P40224 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm14807-201ENSMUST00000116640 983 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm4310-201ENSMUST00000177847 889 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm18460-201ENSMUST00000208088 464 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl12P40224 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.53□□□□□ -0.4
Cxcl12P40224 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl12P40224 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.52□□□□□ -0.4
Cxcl12P40224 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cxcl12P40224 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.52□□□□□ -0.4
Cxcl12P40224 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cxcl12P40224 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cxcl12P40224 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl12P40224 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl12P40224 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm14274-201ENSMUST00000117182 615 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm12218-201ENSMUST00000117666 399 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm5419-201ENSMUST00000119301 527 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm12030-201ENSMUST00000121917 223 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Gm44647-201ENSMUST00000207402 428 ntBASIC12.52□□□□□ -0.41
Cxcl12P40224 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.52□□□□□ -0.41
Cxcl12P40224 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl12P40224 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms