Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a11P31650 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Slc6a11P31650 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Slc6a11P31650 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.63□□□□□ -0.55
Slc6a11P31650 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Slc6a11P31650 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.63□□□□□ -0.55
Slc6a11P31650 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Slc6a11P31650 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.62□□□□□ -0.55
Slc6a11P31650 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm24255-201ENSMUST00000104481 128 ntBASIC11.62□□□□□ -0.55
Slc6a11P31650 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm6621-201ENSMUST00000193251 772 ntBASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Slc6a11P31650 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Slc6a11P31650 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm4986-201ENSMUST00000119731 549 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm12997-201ENSMUST00000120207 640 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm12363-201ENSMUST00000122250 668 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm17376-201ENSMUST00000166016 84 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Rps4l-202ENSMUST00000204242 789 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.61□□□□□ -0.55
Slc6a11P31650 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.61□□□□□ -0.55
Slc6a11P31650 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Slc6a11P31650 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms