Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm44397-201ENSMUST00000195950 113 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gm6983-201ENSMUST00000214912 628 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc6a1P31648 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.53□□□□□ -0.72
Slc6a1P31648 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc6a1P31648 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Slc6a1P31648 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc6a1P31648 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm13829-201ENSMUST00000119600 138 ntBASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.52□□□□□ -0.73
Slc6a1P31648 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.52□□□□□ -0.73
Slc6a1P31648 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.52□□□□□ -0.73
Slc6a1P31648 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Slc6a1P31648 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc6a1P31648 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.51□□□□□ -0.73
Slc6a1P31648 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm11814-201ENSMUST00000119515 929 ntBASIC10.51□□□□□ -0.73
Slc6a1P31648 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Slc6a1P31648 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm6244-201ENSMUST00000178732 841 ntBASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.51□□□□□ -0.73
Slc6a1P31648 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.51□□□□□ -0.73
Slc6a1P31648 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.51□□□□□ -0.73
Slc6a1P31648 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc6a1P31648 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms