Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.05□□□□□ -0.32
Mmp3P28862 Gm2965-201ENSMUST00000198365 343 ntBASIC13.05□□□□□ -0.32
Mmp3P28862 Gm45770-201ENSMUST00000212105 616 ntBASIC13.05□□□□□ -0.32
Mmp3P28862 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.05□□□□□ -0.32
Mmp3P28862 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Gm10288-201ENSMUST00000084614 537 ntBASIC13.05□□□□□ -0.32
Mmp3P28862 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Mmp3P28862 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Mmp3P28862 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.04□□□□□ -0.32
Mmp3P28862 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Mmp3P28862 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Mmp3P28862 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.04□□□□□ -0.32
Mmp3P28862 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.04□□□□□ -0.32
Mmp3P28862 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Ginm1-202ENSMUST00000065124 300 ntBASIC13.04□□□□□ -0.32
Mmp3P28862 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp3P28862 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Mmp3P28862 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm13461-201ENSMUST00000120980 662 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Gm6905-201ENSMUST00000205729 511 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm29787-201ENSMUST00000222129 849 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.03□□□□□ -0.32
Mmp3P28862 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Mmp3P28862 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Mmp3P28862 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp3P28862 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.03□□□□□ -0.32
Mmp3P28862 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Mmp3P28862 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Mmp3P28862 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp3P28862 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms