Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Aldh1a1P24549 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Aldh1a1P24549 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Aldh1a1P24549 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Aldh1a1P24549 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm7722-201ENSMUST00000120646 741 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm1848-201ENSMUST00000120711 789 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm6485-201ENSMUST00000160676 439 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm28925-201ENSMUST00000188586 168 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm9645-201ENSMUST00000197131 792 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.19□□□□□ -0.3
Aldh1a1P24549 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Aldh1a1P24549 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm23912-201ENSMUST00000104687 87 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm37299-201ENSMUST00000193951 826 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm37028-201ENSMUST00000194276 107 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm5298-201ENSMUST00000201122 892 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm3793-201ENSMUST00000204973 672 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm44980-201ENSMUST00000205826 314 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm19091-201ENSMUST00000208120 978 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.18□□□□□ -0.3
Aldh1a1P24549 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Aldh1a1P24549 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aldh1a1P24549 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Aldh1a1P24549 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Aldh1a1P24549 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Aldh1a1P24549 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms