Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm7593-201ENSMUST00000187246 644 ntBASIC10.76□□□□□ -0.69
Ccl3P10855 Gm28324-201ENSMUST00000187913 264 ntBASIC10.76□□□□□ -0.69
Ccl3P10855 Gm18893-201ENSMUST00000198416 943 ntBASIC10.76□□□□□ -0.69
Ccl3P10855 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl3P10855 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccl3P10855 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccl3P10855 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm13916-201ENSMUST00000117368 628 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm11949-201ENSMUST00000117640 372 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm12579-201ENSMUST00000118040 783 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm8731-201ENSMUST00000118088 412 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm11451-201ENSMUST00000118946 630 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm8737-201ENSMUST00000122208 642 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm6485-201ENSMUST00000160676 439 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccl3P10855 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Mir8115-201ENSMUST00000184992 119 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm29499-201ENSMUST00000189151 486 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm28329-201ENSMUST00000191208 689 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm29171-201ENSMUST00000191397 486 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm43186-201ENSMUST00000198130 824 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ccl3P10855 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.75□□□□□ -0.69
Ccl3P10855 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl3P10855 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl3P10855 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Ccl3P10855 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccl3P10855 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccl3P10855 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl3P10855 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccl3P10855 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms