Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ly6c1P0CW02 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm13744-201ENSMUST00000118953 850 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm27046-201ENSMUST00000182160 463 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm10312-201ENSMUST00000078515 489 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Ly6c1P0CW02 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm24590-201ENSMUST00000116699 119 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Mir1192-201ENSMUST00000116976 121 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC10.35□□□□□ -0.75
Ly6c1P0CW02 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms