Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PtcraP0C6B2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm12036-201ENSMUST00000120008 530 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm14247-201ENSMUST00000120950 237 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm8885-201ENSMUST00000189382 598 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm19187-201ENSMUST00000206781 892 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Cts7-204ENSMUST00000225321 1257 ntBASIC10.65□□□□□ -0.7
PtcraP0C6B2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PtcraP0C6B2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PtcraP0C6B2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.64□□□□□ -0.71
PtcraP0C6B2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.64□□□□□ -0.71
PtcraP0C6B2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.64□□□□□ -0.71
PtcraP0C6B2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm45865-201ENSMUST00000211815 945 ntBASIC10.64□□□□□ -0.71
PtcraP0C6B2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PtcraP0C6B2 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms