Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm43758-201ENSMUST00000199500 367 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm26035-201ENSMUST00000083065 308 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm13350-201ENSMUST00000120519 479 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm14381-201ENSMUST00000122105 414 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm7584-201ENSMUST00000175829 940 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm7783-201ENSMUST00000204795 781 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp6P0C0A3 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm31256-201ENSMUST00000194705 506 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.31□□□□□ -0.28
Chmp6P0C0A3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms