Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm29615-201ENSMUST00000185371 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28224-201ENSMUST00000186078 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm29001-201ENSMUST00000186177 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28292-201ENSMUST00000186593 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28101-201ENSMUST00000187608 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm29076-201ENSMUST00000187689 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28302-201ENSMUST00000187931 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28646-201ENSMUST00000188220 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28205-201ENSMUST00000189177 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm29032-201ENSMUST00000189797 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28695-201ENSMUST00000190300 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm37448-201ENSMUST00000192795 697 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hoxa4P06798 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.03□□□□□ -0.48
Hoxa4P06798 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.02□□□□□ -0.48
Hoxa4P06798 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hoxa4P06798 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.02□□□□□ -0.48
Hoxa4P06798 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Gm27627-201ENSMUST00000183644 150 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Gm44262-201ENSMUST00000204969 372 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxa4P06798 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.02□□□□□ -0.49
Hoxa4P06798 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hoxa4P06798 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hoxa4P06798 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.02□□□□□ -0.49
Hoxa4P06798 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Hoxa4P06798 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hoxa4P06798 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms