Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm24934-201ENSMUST00000103764 111 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm14832-201ENSMUST00000121289 322 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm2991-201ENSMUST00000173338 480 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm30285-201ENSMUST00000214614 422 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm9368-201ENSMUST00000219348 831 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm24830-201ENSMUST00000102024 166 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm26956-201ENSMUST00000182176 986 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm27390-201ENSMUST00000184516 176 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm26232-201ENSMUST00000083360 166 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PdgfrbP05622 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.38□□□□□ -0.43
PdgfrbP05622 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfrbP05622 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfrbP05622 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PdgfrbP05622 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms