Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.92□□□□□ -0.66
CcnkO88874 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.92□□□□□ -0.66
CcnkO88874 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.92□□□□□ -0.66
CcnkO88874 Gm8805-201ENSMUST00000117848 313 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm11637-201ENSMUST00000120601 592 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm12291-201ENSMUST00000121627 311 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm2231-201ENSMUST00000125661 612 ntBASIC10.92□□□□□ -0.66
CcnkO88874 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Gm24196-201ENSMUST00000179161 110 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Mir7085-201ENSMUST00000184353 66 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm27486-201ENSMUST00000184923 80 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Mir6420-201ENSMUST00000185032 102 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 Gm37497-201ENSMUST00000195830 798 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Gm6007-201ENSMUST00000208170 823 ntBASIC10.92□□□□□ -0.66
CcnkO88874 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.92□□□□□ -0.66
CcnkO88874 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CcnkO88874 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.92□□□□□ -0.66
CcnkO88874 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CcnkO88874 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcnkO88874 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CcnkO88874 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.91□□□□□ -0.66
CcnkO88874 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Gm11803-201ENSMUST00000119966 444 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Gm13123-201ENSMUST00000122173 492 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.91□□□□□ -0.66
CcnkO88874 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.91□□□□□ -0.66
CcnkO88874 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm8652-201ENSMUST00000181363 964 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.91□□□□□ -0.66
CcnkO88874 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcnkO88874 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.91□□□□□ -0.66
CcnkO88874 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.9□□□□□ -0.66
CcnkO88874 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.9□□□□□ -0.66
CcnkO88874 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.9□□□□□ -0.66
CcnkO88874 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.9□□□□□ -0.66
CcnkO88874 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CcnkO88874 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.9□□□□□ -0.66
CcnkO88874 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.9□□□□□ -0.66
CcnkO88874 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcnkO88874 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms