Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ClppO88696 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.02□□□□□ -0.49
ClppO88696 Gm25214-201ENSMUST00000104573 129 ntBASIC12.02□□□□□ -0.49
ClppO88696 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.02□□□□□ -0.49
ClppO88696 Gm14109-201ENSMUST00000118814 309 ntBASIC12.02□□□□□ -0.49
ClppO88696 Gm13736-201ENSMUST00000119272 253 ntBASIC12.02□□□□□ -0.49
ClppO88696 Gm12997-201ENSMUST00000120207 640 ntBASIC12.02□□□□□ -0.49
ClppO88696 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.02□□□□□ -0.49
ClppO88696 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Gm8885-201ENSMUST00000189382 598 ntBASIC12.02□□□□□ -0.49
ClppO88696 Gm37201-201ENSMUST00000191845 523 ntBASIC12.02□□□□□ -0.49
ClppO88696 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.02□□□□□ -0.49
ClppO88696 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.02□□□□□ -0.49
ClppO88696 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.02□□□□□ -0.49
ClppO88696 Mir339-201ENSMUST00000083659 96 ntBASIC12.02□□□□□ -0.49
ClppO88696 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 BC043934-202ENSMUST00000185694 2356 ntBASIC12.02□□□□□ -0.49
ClppO88696 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
ClppO88696 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.02□□□□□ -0.49
ClppO88696 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ClppO88696 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.02□□□□□ -0.49
ClppO88696 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.02□□□□□ -0.49
ClppO88696 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.02□□□□□ -0.49
ClppO88696 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ClppO88696 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.01□□□□□ -0.49
ClppO88696 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.01□□□□□ -0.49
ClppO88696 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.01□□□□□ -0.49
ClppO88696 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.01□□□□□ -0.49
ClppO88696 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.01□□□□□ -0.49
ClppO88696 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Gm27046-201ENSMUST00000182160 463 ntBASIC12.01□□□□□ -0.49
ClppO88696 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.01□□□□□ -0.49
ClppO88696 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ClppO88696 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.01□□□□□ -0.49
ClppO88696 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClppO88696 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.01□□□□□ -0.49
ClppO88696 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ClppO88696 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.01□□□□□ -0.49
ClppO88696 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ClppO88696 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Gm28323-201ENSMUST00000186817 2499 ntBASIC12□□□□□ -0.49
ClppO88696 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12□□□□□ -0.49
ClppO88696 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12□□□□□ -0.49
ClppO88696 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12□□□□□ -0.49
ClppO88696 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms