Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pknox1O70477 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.14□□□□□ -0.47
Pknox1O70477 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.14□□□□□ -0.47
Pknox1O70477 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pknox1O70477 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pknox1O70477 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pknox1O70477 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Gm8602-201ENSMUST00000184045 607 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Gm6266-201ENSMUST00000203844 806 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.13□□□□□ -0.47
Pknox1O70477 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pknox1O70477 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pknox1O70477 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Pknox1O70477 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pknox1O70477 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pknox1O70477 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pknox1O70477 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.12□□□□□ -0.47
Pknox1O70477 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pknox1O70477 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.12□□□□□ -0.47
Pknox1O70477 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pknox1O70477 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.12□□□□□ -0.47
Pknox1O70477 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.12□□□□□ -0.47
Pknox1O70477 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.12□□□□□ -0.47
Pknox1O70477 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.12□□□□□ -0.47
Pknox1O70477 Gm39404-201ENSMUST00000216350 313 ntBASIC12.12□□□□□ -0.47
Pknox1O70477 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pknox1O70477 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pknox1O70477 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms