Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgceO70258 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgceO70258 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgceO70258 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SgceO70258 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.97□□□□□ -0.65
SgceO70258 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.97□□□□□ -0.65
SgceO70258 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SgceO70258 Gm27243-201ENSMUST00000183964 521 ntBASIC10.97□□□□□ -0.65
SgceO70258 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.97□□□□□ -0.65
SgceO70258 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SgceO70258 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Gm25857-201ENSMUST00000082788 129 ntBASIC10.97□□□□□ -0.65
SgceO70258 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SgceO70258 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.97□□□□□ -0.65
SgceO70258 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.97□□□□□ -0.65
SgceO70258 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SgceO70258 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SgceO70258 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgceO70258 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.96□□□□□ -0.65
SgceO70258 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgceO70258 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SgceO70258 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
SgceO70258 Mir1247-201ENSMUST00000116706 82 ntBASIC10.96□□□□□ -0.65
SgceO70258 Gm13736-201ENSMUST00000119272 253 ntBASIC10.96□□□□□ -0.65
SgceO70258 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.96□□□□□ -0.65
SgceO70258 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.96□□□□□ -0.65
SgceO70258 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.96□□□□□ -0.65
SgceO70258 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.96□□□□□ -0.65
SgceO70258 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.96□□□□□ -0.65
SgceO70258 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.96□□□□□ -0.65
SgceO70258 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.96□□□□□ -0.65
SgceO70258 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.96□□□□□ -0.65
SgceO70258 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgceO70258 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
SgceO70258 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.96□□□□□ -0.66
SgceO70258 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SgceO70258 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
SgceO70258 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgceO70258 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms