Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Copb2O55029 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 Gm9555-201ENSMUST00000200908 583 ntBASIC14.03□□□□□ -0.16
Copb2O55029 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Copb2O55029 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.03□□□□□ -0.16
Copb2O55029 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.03□□□□□ -0.16
Copb2O55029 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Copb2O55029 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.03□□□□□ -0.16
Copb2O55029 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Copb2O55029 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Copb2O55029 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.03□□□□□ -0.16
Copb2O55029 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.03□□□□□ -0.16
Copb2O55029 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Copb2O55029 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.02□□□□□ -0.16
Copb2O55029 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.02□□□□□ -0.16
Copb2O55029 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.02□□□□□ -0.16
Copb2O55029 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Copb2O55029 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Copb2O55029 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.02□□□□□ -0.17
Copb2O55029 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.02□□□□□ -0.17
Copb2O55029 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.02□□□□□ -0.17
Copb2O55029 Gm43378-201ENSMUST00000199336 582 ntBASIC14.02□□□□□ -0.17
Copb2O55029 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.02□□□□□ -0.17
Copb2O55029 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Copb2O55029 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Copb2O55029 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Copb2O55029 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Copb2O55029 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Copb2O55029 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.01□□□□□ -0.17
Copb2O55029 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Copb2O55029 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm27530-201ENSMUST00000184096 98 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm43947-201ENSMUST00000203019 959 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Gm4607-201ENSMUST00000206649 577 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.01□□□□□ -0.17
Copb2O55029 Gm5369-201ENSMUST00000217499 588 ntBASIC14.01□□□□□ -0.17
Copb2O55029 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.01□□□□□ -0.17
Copb2O55029 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms