Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm29705-201ENSMUST00000212598 474 ntBASIC11.07□□□□□ -0.64
Rnf13O54965 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf13O54965 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf13O54965 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf13O54965 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.06□□□□□ -0.64
Rnf13O54965 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf13O54965 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Rnf13O54965 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf13O54965 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm11814-201ENSMUST00000119515 929 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 Gm13492-201ENSMUST00000119772 665 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm24196-201ENSMUST00000179161 110 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf13O54965 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf13O54965 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf13O54965 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf13O54965 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf13O54965 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rnf13O54965 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Rnf13O54965 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.06□□□□□ -0.64
Rnf13O54965 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf13O54965 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf13O54965 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rnf13O54965 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.05□□□□□ -0.64
Rnf13O54965 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rnf13O54965 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rnf13O54965 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.05□□□□□ -0.64
Rnf13O54965 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.05□□□□□ -0.64
Rnf13O54965 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Gm9002-201ENSMUST00000178437 499 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 Gm6007-201ENSMUST00000208170 823 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.05□□□□□ -0.64
Rnf13O54965 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Rnf13O54965 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rnf13O54965 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms