Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Mir669a-11-201ENSMUST00000197952 87 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 Mir669a-4-201ENSMUST00000198665 87 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Mir669a-9-201ENSMUST00000200087 87 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 Mir669a-8-201ENSMUST00000200268 87 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 Gm17812-201ENSMUST00000204935 318 ntBASIC13.73□□□□□ -0.21
Sptlc1O35704 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sptlc1O35704 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sptlc1O35704 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm23776-201ENSMUST00000158993 325 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm16147-201ENSMUST00000162143 373 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm37355-201ENSMUST00000193345 606 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm37490-201ENSMUST00000195566 724 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 AC154646.1-201ENSMUST00000225011 1092 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.72□□□□□ -0.21
Sptlc1O35704 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Sptlc1O35704 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sptlc1O35704 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sptlc1O35704 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm43216-201ENSMUST00000196295 1333 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm15529-201ENSMUST00000121833 994 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm7289-201ENSMUST00000168993 734 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm42430-201ENSMUST00000197209 616 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 AC154515.3-201ENSMUST00000225081 1159 ntBASIC13.71□□□□□ -0.21
Sptlc1O35704 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.71□□□□□ -0.21
Sptlc1O35704 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sptlc1O35704 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms